Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 34 curated entries in PaperBLAST's database that match '4.3.1.3'.
These curated entries have 26 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
| DVU2559: adenosylmethionine--8-amino-7-oxononanoate aminotransferase is similar to: | PaperBLAST |
pbfA / A3UZK3: (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase (EC 4.3.1.33) from Vibrio splendidus | 28% id, 87% cov |
| DVU2347: acetylornithine aminotransferase is similar to: | PaperBLAST |
pbfA / A3UZK3: (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase (EC 4.3.1.33) from Vibrio splendidus | 25% id, 86% cov |
| DVU2757: radical SAM domain protein is similar to: | PaperBLAST |
fbiC / E5ASS1: FO synthase (EC 4.3.1.32; EC 2.5.1.147) from Mycetohabitans rhizoxinica | 37% id, 44% cov |
fbiC / Q7U0G9: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC 4.3.1.32; EC 2.5.1.147) from Mycobacterium bovis | 40% id, 38% cov |
| DVU2756: radical SAM domain protein is similar to: | PaperBLAST |
fbiC / E5ASS1: FO synthase (EC 4.3.1.32; EC 2.5.1.147) from Mycetohabitans rhizoxinica | 37% id, 44% cov |
fbiC / Q7U0G9: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC 4.3.1.32; EC 2.5.1.147) from Mycobacterium bovis | 38% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2440537-2441937 (frame -1) on 1944 is similar to: | PaperBLAST |
pbfA / A3UZK3: (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase (EC 4.3.1.33) from Vibrio splendidus | 24% id, 92% cov |
| 2864697-2865965 (frame +3) on 1944 is similar to: | PaperBLAST |
fbiC / Q7U0G9: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC 4.3.1.32; EC 2.5.1.147) from Mycobacterium bovis | 38% id, 43% cov |
Lawrence Berkeley National Laboratory