Searching in Desulfovibrio vulgaris Hildenborough (882)
Found 6 curated entries in PaperBLAST's database that match '5.1.1.5' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query
| DVU0955: alanine racemase is similar to: | PaperBLAST |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 28% id, 90% cov |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 25% id, 88% cov |
| DVU0492: N-acetyl-gamma-glutamyl-phosphate reductase is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 40% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1050152-1051336 (frame +2) on 1944 is similar to: | PaperBLAST |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 27% id, 93% cov |
| 561269-562339 (frame -3) on 1944 is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 39% id, 51% cov |
Lawrence Berkeley National Laboratory