Curated BLAST for Genomes


Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 13 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1867: diaminopimelate epimerase
is similar to:

E4NI20: diaminopimelate epimerase (EC from Kitasatospora setae

34% id,
97% cov

DAPF_THEMA / Q9X1L0: Diaminopimelate epimerase; DAP epimerase; Dpm epimerase; PLP-independent amino acid racemase; EC from Thermotoga maritima

31% id,
96% cov

DAPF_BACAN / Q81XR2: Diaminopimelate epimerase; DAP epimerase; PLP-independent amino acid racemase; EC from Bacillus anthracis

30% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory