Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 22 curated entries in PaperBLAST's database that match '6.1.1.23' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3367: aspartyl-tRNA synthetase is similar to:	PaperBLAST
DvMF_2038: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Desulfovibrio vulgaris	83% id, 99% cov
Q9KDG1: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bacillus halodurans	57% id, 98% cov
O32038: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bacillus subtilis	56% id, 99% cov
SYDND_PSEAE / Q51422: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Pseudomonas aeruginosa	53% id, 100% cov
SYDND_HELPY / P56459: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Helicobacter pylori	52% id, 100% cov
Synpcc7942_1313: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Synechococcus elongatus	51% id, 98% cov
aspS / P21889: aspartate—tRNA ligase (EC 6.1.1.23) from Escherichia coli	50% id, 99% cov
SYDND_CHLTR / O84546: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Chlamydia trachomatis	49% id, 99% cov
aspS1 / Q9RUN7: aspartyl-tRNA synthetase subunit (EC 6.1.1.23) from Deinococcus radiodurans	49% id, 99% cov
Q6MI59: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bdellovibrio bacteriovorus	51% id, 93% cov
PGA1_c24530: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Phaeobacter inhibens	43% id, 99% cov
CCNA_01969: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Caulobacter crescentus	43% id, 98% cov
Dshi_2633: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Dinoroseobacter shibae	42% id, 99% cov
SYDND_HALSA / O07683: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Halobacterium salinarum O07683: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Halobacterium salinarum	30% id, 86% cov
SYDND_METTH / O26328: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanothermobacter thermautotrophicus O26328: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Methanothermobacter thermautotrophicus	38% id, 67% cov
SYDND_METMA / Q8Q0R2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanosarcina mazei	34% id, 65% cov
SYDND_DEIRA / Q9RVH4: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase 2; AspRS2; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Deinococcus radiodurans aspS2 / Q9RVH4: aspartyl-tRNA synthetase, non-discriminating (EC 6.1.1.23) from Deinococcus radiodurans	27% id, 71% cov
SYDND_THET8 / Q5SIC2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase 2; AspRS2; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Thermus thermophilus	30% id, 63% cov
More...

DVU0007: asparaginyl-tRNA synthetase is similar to:	PaperBLAST
SYDND_HALSA / O07683: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Halobacterium salinarum O07683: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Halobacterium salinarum	30% id, 100% cov
SYDND_METTH / O26328: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanothermobacter thermautotrophicus O26328: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Methanothermobacter thermautotrophicus	29% id, 93% cov
SYDND_METMA / Q8Q0R2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanosarcina mazei	28% id, 93% cov
C4LZN0: aspartate-tRNA ligase (EC 6.1.1.12); aspartate-tRNAAsn ligase (EC 6.1.1.23) from Entamoeba histolytica	33% id, 58% cov
O32038: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bacillus subtilis	26% id, 44% cov
SYDND_HELPY / P56459: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Helicobacter pylori	28% id, 34% cov
aspS / P21889: aspartate—tRNA ligase (EC 6.1.1.23) from Escherichia coli	29% id, 33% cov
Q6MI59: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bdellovibrio bacteriovorus	29% id, 26% cov
DvMF_2038: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Desulfovibrio vulgaris	30% id, 24% cov
aspS1 / Q9RUN7: aspartyl-tRNA synthetase subunit (EC 6.1.1.23) from Deinococcus radiodurans	31% id, 18% cov
SYDND_PSEAE / Q51422: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Pseudomonas aeruginosa	33% id, 17% cov
SYDND_CHLTR / O84546: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Chlamydia trachomatis	36% id, 13% cov
Dshi_2633: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Dinoroseobacter shibae	31% id, 13% cov
CCNA_01969: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Caulobacter crescentus	31% id, 12% cov
PGA1_c24530: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Phaeobacter inhibens	30% id, 13% cov
More...

VIMSS207864: lysyl-tRNA synthetase is similar to:	PaperBLAST
SYDND_HALSA / O07683: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Halobacterium salinarum O07683: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Halobacterium salinarum	29% id, 94% cov
SYDND_METMA / Q8Q0R2: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanosarcina mazei	28% id, 93% cov
SYDND_METTH / O26328: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Methanothermobacter thermautotrophicus O26328: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Methanothermobacter thermautotrophicus	26% id, 94% cov
C4LZN0: aspartate-tRNA ligase (EC 6.1.1.12); aspartate-tRNAAsn ligase (EC 6.1.1.23) from Entamoeba histolytica	29% id, 68% cov
SYDND_HELPY / P56459: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Helicobacter pylori	23% id, 55% cov
SYDND_CHLTR / O84546: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Chlamydia trachomatis	25% id, 48% cov
SYDND_HELPY / P56459: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Helicobacter pylori	26% id, 46% cov
SYDND_PSEAE / Q51422: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Pseudomonas aeruginosa	32% id, 25% cov
DvMF_2038: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Desulfovibrio vulgaris	30% id, 24% cov
aspS1 / Q9RUN7: aspartyl-tRNA synthetase subunit (EC 6.1.1.23) from Deinococcus radiodurans	33% id, 19% cov
aspS / P21889: aspartate—tRNA ligase (EC 6.1.1.23) from Escherichia coli	29% id, 21% cov
PGA1_c24530: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Phaeobacter inhibens	38% id, 14% cov
Q9KDG1: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bacillus halodurans	35% id, 14% cov
SYDND_CHLTR / O84546: Aspartate--tRNA(Asp/Asn) ligase; Aspartyl-tRNA synthetase; AspRS; Non-discriminating aspartyl-tRNA synthetase; ND-AspRS; EC 6.1.1.23 from Chlamydia trachomatis	34% id, 15% cov
Synpcc7942_1313: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Synechococcus elongatus	30% id, 16% cov
O32038: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bacillus subtilis	32% id, 14% cov
Dshi_2633: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Dinoroseobacter shibae	49% id, 9% cov
CCNA_01969: aspartyl-tRNA(Asp/Asn) synthetase (EC 6.1.1.23) from Caulobacter crescentus	62% id, 6% cov
Q6MI59: aspartate-tRNAAsn ligase (EC 6.1.1.23) from Bdellovibrio bacteriovorus	59% id, 6% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory