Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 13 curated entries in PaperBLAST's database that match '6.3.1.11'.

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU3392: glutamine synthetase, type I
is similar to:
PaperBLAST

SO1268: Glutamate--putrescine ligase (EC 6.3.1.11) from Shewanella oneidensis

29% id,
98% cov

Pf1N1B4_2254: Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) from Pseudomonas fluorescens

29% id,
99% cov

Psest_4288: Glutamate--putrescine ligase (EC 6.3.1.11) from Pseudomonas stutzeri

29% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory