Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 140 curated entries in PaperBLAST's database that match '6.3.1.2'.

These curated entries have 101 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0723: phosphoribosylglycinamide formyltransferase 2 is similar to:	PaperBLAST
E8X9F0: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Salmonella enterica	65% id, 100% cov
PURT_ECOLI / P33221: Formate-dependent phosphoribosylglycinamide formyltransferase; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2; GART 2; GAR transformylase T; Non-folate glycinamide ribonucleotide transformylase; Phosphoribosylglycinamide formyltransferase 2; EC 6.3.1.21 from Escherichia coli purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Escherichia coli	65% id, 100% cov
purT / Q58881: phosphoribosylglycinamide formyltransferase monomer (EC 6.3.1.21) from Methanocaldococcus jannaschii	61% id, 100% cov
P95197: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21) from Mycobacterium tuberculosis	39% id, 95% cov
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DVU1258: glutamine synthetase, type III is similar to:	PaperBLAST
glnN / Q31RW8: glutamine synthetase type III subunit (EC 6.3.1.2) from Synechococcus elongatus	57% id, 100% cov
gluN / Q4ZH57: glutamine synthetase subunit (EC 6.3.1.2) from Ruminococcus albus	54% id, 99% cov
GLNA3_BACFR / P15623: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Bacteroides fragilis	42% id, 100% cov
Q5LGP1: glutamine synthetase (EC 6.3.1.2) from Bacteroides fragilis	42% id, 100% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	28% id, 63% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	28% id, 63% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	23% id, 75% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	26% id, 62% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	29% id, 39% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	27% id, 41% cov
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DVU3392: glutamine synthetase, type I is similar to:	PaperBLAST
GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei	53% id, 100% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	52% id, 99% cov
P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	50% id, 98% cov
GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii	50% id, 98% cov
GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus	49% id, 98% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	49% id, 98% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	48% id, 98% cov
GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	49% id, 95% cov
Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus	45% id, 98% cov
P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei	45% id, 97% cov
GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.	42% id, 96% cov
GLNA_SULAC / Q9HH09: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Sulfolobus acidocaldarius Q9HH09: glutamine synthetase (EC 6.3.1.2) from Sulfolobus acidocaldarius	43% id, 90% cov
GLNA_ARCFU / O29313: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Archaeoglobus fulgidus O29313: glutamine synthetase (EC 6.3.1.2) from Archaeoglobus fulgidus	36% id, 98% cov
GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti	32% id, 99% cov
F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	29% id, 98% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	45% id, 62% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	45% id, 61% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	43% id, 60% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	43% id, 60% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	41% id, 62% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	42% id, 61% cov
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	47% id, 52% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	40% id, 58% cov
O85177: glutamine synthetase (EC 6.3.1.2) from Amycolatopsis mediterranei	44% id, 52% cov
Q7ZVF2: glutamine synthetase (EC 6.3.1.2) from Danio rerio	25% id, 92% cov
Q7T2P7: glutamine synthetase (EC 6.3.1.2) from Danio rerio	25% id, 87% cov
GLNA_RAT / P09606: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Rattus norvegicus P09606: glutamine synthetase (EC 6.3.1.2) from Rattus norvegicus	28% id, 77% cov
GLNA_HUMAN / P15104: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Homo sapiens GLUL / P15104: glutamine synthetase subunit (EC 6.3.1.2) from Homo sapiens P15104: glutamine synthetase (EC 6.3.1.2) from Homo sapiens	27% id, 77% cov
GLNA_CANLF / Q8HZM5: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Canis lupus Q8HZM5: glutamine synthetase (EC 6.3.1.2) from Canis lupus	27% id, 77% cov
GLNA_MOUSE / P15105: Glutamine synthetase; GS; Glutamate--ammonia ligase; Palmitoyltransferase GLUL; EC 6.3.1.2; EC 2.3.1.225 from Mus musculus P15105: glutamine synthetase (EC 6.3.1.2) from Mus musculus	27% id, 77% cov
P46410: glutamine synthetase (EC 6.3.1.2) from Sus scrofa	26% id, 79% cov
GLNA_SQUAC / P41320: Glutamine synthetase, mitochondrial; Glutamate--ammonia ligase; EC 6.3.1.2 from Squalus acanthias	28% id, 49% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	29% id, 46% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	30% id, 42% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	31% id, 41% cov
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	27% id, 45% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	38% id, 29% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	38% id, 29% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	32% id, 31% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	31% id, 32% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory