Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 6 curated entries in PaperBLAST's database that match '2-oxoacid:ferredoxin oxidoreductase%subunit beta' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU1570: pyruvate ferredoxin oxidoreductase, beta subunit
is similar to:
PaperBLAST

OFOB1_SULTO / Q96Y68: 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii

43% id,
87% cov

OFOB_SULSP / P72579: 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.

43% id,
87% cov

OFOB_SACSO / A0A0E3KBH3: 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Saccharolobus solfataricus

40% id,
91% cov

More...

DVU1946: pyruvate ferredoxin oxidoreductase, beta subunit, putative
is similar to:
PaperBLAST

OFOB_SACSO / A0A0E3KBH3: 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Saccharolobus solfataricus

36% id,
85% cov

OFOB2_SULTO / Q96XT4: 2-oxoacid:ferredoxin oxidoreductase 2, subunit beta; OFOR2; EC 1.2.7.11 from Sulfurisphaera tokodaii

35% id,
85% cov

OFOB1_SULTO / Q96Y68: 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii

35% id,
84% cov

More...

DVU3348: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit, putative
is similar to:
PaperBLAST

OFOB_SACSO / A0A0E3KBH3: 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Saccharolobus solfataricus

33% id,
62% cov

OFOB1_SULTO / Q96Y68: 2-oxoacid:ferredoxin oxidoreductase 1, subunit beta; OFOR1; EC 1.2.7.11 from Sulfurisphaera tokodaii

32% id,
62% cov

OFOB_SULSP / P72579: 2-oxoacid:ferredoxin oxidoreductase subunit beta; OFOR; EC 1.2.7.11 from Sulfolobus sp.

32% id,
62% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory