Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 3 curated entries in PaperBLAST's database that match 'ATP-dependent reduction of co(II)balamin' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0908: iron-sulfur cluster-binding protein, putative
is similar to:
PaperBLAST

DVU0908: ATP-dependent reduction of co(II)balamin from Desulfovibrio vulgaris

100% id,
100% cov

DvMF_1398: ATP-dependent reduction of co(II)balamin (RamA-like) from Desulfovibrio vulgaris

26% id,
63% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory