Curated BLAST for Genomes

 

Curated BLAST

Searching in Desulfovibrio vulgaris Hildenborough (882)

Found 9 curated entries in PaperBLAST's database that match 'anthranilate synthase component 1' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Desulfovibrio vulgaris Hildenborough, or try another query

DVU0465: anthranilate synthase, component I
is similar to:
PaperBLAST

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

38% id,
95% cov

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

39% id,
93% cov

TRPE_ECOLI / P00895: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Escherichia coli

36% id,
96% cov

More...

VIMSS209297: para-aminobenzoate synthase, component I
is similar to:
PaperBLAST

TRPE_SACS2 / Q06128: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Saccharolobus solfataricus

33% id,
74% cov

TRPE_PSEPU / P20579: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas putida

33% id,
62% cov

TRPE_PSEAE / P20580: Anthranilate synthase component 1; AS; ASI; EC 4.1.3.27 from Pseudomonas aeruginosa

32% id,
58% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory