Curated BLAST for Genomes

 

Curated BLAST

Searching in Chlorobaculum tepidum TLS (GCF_000006985.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Chlorobaculum tepidum TLS, or try another query

AYT24_RS00040 CT0008 WP_010931702.1: ROK family protein
is similar to:
PaperBLAST

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

41% id,
96% cov

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

40% id,
99% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

31% id,
97% cov

More...

AYT24_RS09060 CT2007 WP_010933663.1: ROK family protein
is similar to:
PaperBLAST

Q8RDE9: glucokinase (EC 2.7.1.2) from Caldanaerobacter subterraneus

36% id,
99% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

35% id,
96% cov

GLK_BACSU / P54495: Glucokinase; Glucose kinase; EC 2.7.1.2 from Bacillus subtilis
P54495: glucokinase (EC 2.7.1.2) from Bacillus subtilis

35% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory