Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Methanosarcina mazei Go1 (GCF_000007065.1)

Found 75 curated entries in PaperBLAST's database that match '2.6.1.42' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methanosarcina mazei Go1, or try another query

ilvE MM_RS05445 MM_1045 WP_015411527.1: branched-chain-amino-acid transaminase is similar to:	PaperBLAST
ilvE / A6UWA0: branched-chain amino acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Methanococcus aeolicus A6UWA0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus aeolicus	55% id, 100% cov
A0A1B1L2T7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Bacillus thuringiensis	54% id, 98% cov
GB\|AAU18968.1: branched-chain amino acid aminotransferase 2; EC 2.6.1.42 from Bacillus cereus	54% id, 98% cov
E6TUA8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Evansella cellulosilytica	53% id, 97% cov
ilvE / O27481: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.42) from Methanothermobacter thermautotrophicus	46% id, 93% cov
Psest_0450: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Pseudomonas stutzeri	42% id, 94% cov
ilvE / O86428: branched-chain-amino-acid aminotransferase subunit (EC 2.6.1.6; EC 2.6.1.42) from Pseudomonas aeruginosa O86428: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Pseudomonas aeruginosa	41% id, 94% cov
F2L0W0: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermoproteus uzoniensis	38% id, 100% cov
BPHYT_RS16285: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Burkholderia phytofirmans	41% id, 93% cov
IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli ilvE / RF\|YP_026247: branched-chain-amino-acid aminotransferase; EC 2.6.1.42 from Escherichia coli ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli	40% id, 91% cov
ABZR86_RS11580: Branched-chain amino acid aminotransferase (EC 2.6.1.42) from Dyella japonica	37% id, 91% cov
F0QW25: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Vulcanisaeta moutnovskia	36% id, 95% cov
A6UP94: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Methanococcus vannielii	33% id, 99% cov
P54691: branched-chain-amino-acid transaminase (EC 2.6.1.42); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Synechocystis sp.	34% id, 95% cov
D1CCW1: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermobaculum terrenum	31% id, 90% cov
ILVE1_BACSU / O31461: Branched-chain-amino-acid transaminase 1; BCAT 1; EC 2.6.1.42 from Bacillus subtilis ilvE / O31461: branched-chain amino acid aminotransferase (EC 2.6.1.6; EC 2.6.1.42) from Bacillus subtilis	31% id, 78% cov
A0A0A0LJI6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	42% id, 52% cov
Q9LPM9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	29% id, 72% cov
Q93Y32: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	27% id, 77% cov
BCAT2_ARATH / Q9M439: Branched-chain-amino-acid aminotransferase 2, chloroplastic; Atbcat-2; EC 2.6.1.42 from Arabidopsis thaliana Q9M439: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	28% id, 68% cov
A0A0A0KG15: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	30% id, 63% cov
B9L0B7: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermomicrobium roseum	40% id, 47% cov
A0A0A0LN48: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Cucumis sativus	29% id, 64% cov
B6RFK8: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Nicotiana benthamiana	29% id, 65% cov
Q70KX9: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Hordeum vulgare	30% id, 61% cov
D0LR31: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Haliangium ochraceum	34% id, 55% cov
BCAT2_HUMLU / K7QHS5: Branched-chain amino acid aminotransferase 2, chloroplastic; HlBCAT2; EC 2.6.1.42 from Humulus lupulus	29% id, 61% cov
Q9FYA6: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	31% id, 58% cov
BCAT1_HUMLU / K7QKH1: Branched-chain amino acid aminotransferase 1, mitochondrial; HlBCAT1; EC 2.6.1.42 from Humulus lupulus	29% id, 61% cov
BCAT3_ARATH / Q9M401: Branched-chain-amino-acid aminotransferase 3, chloroplastic; Atbcat-3; EC 2.6.1.42; EC 2.6.1.88 from Arabidopsis thaliana Q9M401: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Arabidopsis thaliana	29% id, 60% cov
More...

MM_RS09350 MM_1802 WP_011033740.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.	26% id, 96% cov

MM_RS12280 MM_2368 WP_048038594.1: pyridoxal phosphate-dependent aminotransferase is similar to:	PaperBLAST
A0A060PQX5: branched-chain-amino-acid transaminase (EC 2.6.1.42) from Thermococcus sp.	27% id, 88% cov

cobD MM_RS10680 MM_2060 WP_011033992.1: threonine-phosphate decarboxylase CobD is similar to:	PaperBLAST
Ac3H11_1358: L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) from Acidovorax sp.	25% id, 61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2437773-2438975 (frame +3) on NC_003901.1 Methanosarcina mazei Go1, complete sequence is similar to:	PaperBLAST
BWI76_RS24235: Branched-chain-amino-acid transaminase (EC 2.6.1.42) from Klebsiella michiganensis	26% id, 98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory