Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanosarcina mazei Go1 (GCF_000007065.1)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanosarcina mazei Go1, or try another query

MM_RS09140 MM_1762 WP_011033702.1: mevalonate kinase
is similar to:
PaperBLAST

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

31% id,
33% cov

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

26% id,
40% cov

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

27% id,
37% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2101819-2102772 (frame +1) on NC_003901.1 Methanosarcina mazei Go1, complete sequence
is similar to:
PaperBLAST

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi
Also see hits to annotated proteins above

30% id,
37% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory