Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanosarcina mazei Go1 (GCF_000007065.1)

Found 4 curated entries in PaperBLAST's database that match '6.1.1.27' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanosarcina mazei Go1, or try another query

sepS MM_RS07170 MM_1383 WP_011033329.1: O-phosphoserine--tRNA ligase
is similar to:
PaperBLAST

O30126: O-phospho-L-serine-tRNA ligase (EC 6.1.1.27) from Archaeoglobus fulgidus

59% id,
100% cov

SEPS_METJA / Q59054: O-phosphoserine--tRNA(Cys) ligase; O-phosphoserine--tRNA ligase; Non-canonical O-phosphoseryl-tRNA(Cys) synthetase; O-phosphoseryl-tRNA(Cys) synthetase; SepRS; EC 6.1.1.27 from Methanocaldococcus jannaschii
sepS / Q59054: O-phosphoseryl-tRNA ligase monomer (EC 6.1.1.27) from Methanocaldococcus jannaschii
Q59054: O-phospho-L-serine-tRNA ligase (EC 6.1.1.27) from Methanocaldococcus jannaschii

50% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory