Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanosarcina acetivorans C2A (GCF_000007345.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.1.13' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanosarcina acetivorans C2A, or try another query

MA_RS23980 MA4595 WP_011024468.1: prephenate dehydrogenase
is similar to:
PaperBLAST

A0A101IGG2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Methanothrix harundinacea

56% id,
95% cov

Ga0059261_2298: prephenate and/or arogenate dehydrogenase (EC 1.3.1.13) from Sphingomonas koreensis

33% id,
92% cov

A8AAX2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis

30% id,
70% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory