Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Methanosarcina acetivorans C2A (GCF_000007345.1)

Found 3 curated entries in PaperBLAST's database that match '2.2.1.11' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Methanosarcina acetivorans C2A, or try another query

MA_RS20300 MA3889 WP_048065835.1: aldolase
is similar to:

PaperBLAST

DKFP_METJA / Q58980: Fructose-bisphosphate aldolase/6-deoxy-5-ketofructose 1-phosphate synthase; DKFP synthase; Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 2.2.1.11; EC 4.1.2.13 from Methanocaldococcus jannaschii
MJ1585 / Q58980: fructose 1,6-bisphosphate aldolase monomer (EC 2.2.1.11; EC 4.1.2.13) from Methanocaldococcus jannaschii
Q58980: 6-deoxy-5-ketofructose 1-phosphate synthase (EC 2.2.1.11) from Methanocaldococcus jannaschii

66% id,
96% cov

MA_RS13900 MA2666 WP_048065481.1: aldolase
is similar to:

PaperBLAST

63% id,
95% cov

MA_RS02300 MA0439 WP_011020491.1: 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
is similar to:

PaperBLAST

28% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4782446-4783471 (frame +2) on NC_003552.1 Methanosarcina acetivorans C2A, complete sequence
is similar to:

PaperBLAST

65% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory