Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Methanosarcina acetivorans C2A (GCF_000007345.1)

Found 52 curated entries in PaperBLAST's database that match '2.5.1.19' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Methanosarcina acetivorans C2A, or try another query

aroA MA_RS23690 MA4544 WP_011024417.1: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to:	PaperBLAST
Q482G5: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Colwellia psychrerythraea	38% id, 98% cov
A0A2K1XRJ2: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Populus trichocarpa	38% id, 94% cov
B8CWX4: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Halothermothrix orenii	36% id, 100% cov
B1XM36: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Synechococcus sp.	37% id, 95% cov
A0A0P4UM05: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Leptolyngbya boryana	38% id, 92% cov
K9RIB8: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Rivularia sp.	36% id, 96% cov
AROA_KLEPN / P24497: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS; EC 2.5.1.19 from Klebsiella pneumoniae	35% id, 97% cov
K9TX81: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Chroococcidiopsis thermalis	37% id, 94% cov
AROA_ECOLI / P0A6D3: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS; EC 2.5.1.19 from Escherichia coli AroA / b0908: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Escherichia coli aroA / P0A6D3: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Escherichia coli P0A6D3: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Escherichia coli	35% id, 97% cov
K9TRT1: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Oscillatoria sp.	36% id, 94% cov
K9VBD9: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Oscillatoria sp.	37% id, 92% cov
AROA_VIBCH / Q9KRB0: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS; EC 2.5.1.19 from Vibrio cholerae Q9KRB0: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Vibrio cholerae	35% id, 97% cov
aroE / P20691: 5-enolpyruvoylshikimate-3-phosphate synthase (EC 2.5.1.19) from Bacillus subtilis	34% id, 98% cov
I4GHG6: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Microcystis aeruginosa	36% id, 94% cov
A6TL04: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Alkaliphilus metalliredigens	34% id, 99% cov
Q31RQ5: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Synechococcus elongatus Q5N2J9: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Synechococcus elongatus	36% id, 94% cov
K9QNN0: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Nostoc sp.	36% id, 92% cov
A0A0D6KU47: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Tolypothrix sp.	36% id, 94% cov
A0A139XBW5: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Scytonema hofmannii	37% id, 91% cov
C9EGX2: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Rahnella aquatilis	34% id, 97% cov
AROA_COXBU / Q83E11: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS; EC 2.5.1.19 from Coxiella burnetii Q83E11: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Coxiella burnetii	34% id, 98% cov
AROA1_HALH5 / Q9KCA6: 3-phosphoshikimate 1-carboxyvinyltransferase 1; 5-enolpyruvylshikimate-3-phosphate synthase 1; EPSP synthase 1; EPSPS 1; EC 2.5.1.19 from Halalkalibacterium halodurans	34% id, 97% cov
K9PSG5: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Calothrix sp.	34% id, 95% cov
Q93VK6: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Oryza sativa	38% id, 84% cov
B2IYE4: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Nostoc punctiforme	34% id, 95% cov
B4VHX1: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Coleofasciculus chthonoplastes	35% id, 92% cov
A3TGI7: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Janibacter sp.	34% id, 94% cov
F5A7Q0: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Bacillus cereus	33% id, 98% cov
Q8YMB5: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Nostoc sp.	33% id, 95% cov
A6WUV8: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Brucella anthropi	33% id, 96% cov
C3MC80: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Sinorhizobium fredii	32% id, 98% cov
Q3MAV9: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Nostoc sp.	33% id, 95% cov
AROA_AGRSC / Q9R4E4: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS; EC 2.5.1.19 from Agrobacterium sp. Q9R4E4: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Agrobacterium sp.	33% id, 96% cov
B4WHQ7: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Synechococcus sp.	32% id, 96% cov
AROA_PETHY / P11043: 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EC 2.5.1.19 from Petunia hybrida	36% id, 83% cov
AROA_STRPN / Q9S400: 3-phosphoshikimate 1-carboxyvinyltransferase; 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS; EC 2.5.1.19 from Streptococcus pneumoniae Q9S400: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Streptococcus pneumoniae	29% id, 99% cov
A2T9R8: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Dunaliella salina	32% id, 82% cov
A1Z0H6: 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) from Pseudomonas fluorescens	29% id, 91% cov
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	33% id, 29% cov
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	32% id, 28% cov
More...

MA_RS23975 MA4594 WP_011024467.1: shikimate dehydrogenase is similar to:	PaperBLAST
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae	31% id, 18% cov
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	28% id, 18% cov

MA_RS16895 MA3237 WP_048065644.1: shikimate kinase is similar to:	PaperBLAST
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans	32% id, 6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory