Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanosarcina acetivorans C2A (GCF_000007345.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Methanosarcina acetivorans C2A, or try another query

MA_RS11965 MA2304 WP_011022283.1: phosphoserine transaminase
is similar to:		 PaperBLAST

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

 100% id,
100% cov

MA_RS09470 MA1819 WP_011021821.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 47% id,
98% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 44% id,
98% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

 43% id,
98% cov

More...

MA_RS09455 MA1816 WP_048065228.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 45% id,
99% cov

MA_RS08890 MA1712 WP_048065191.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 46% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 41% id,
100% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 33% id,
98% cov

More...

MA_RS03340 MA0636 WP_011020683.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 40% id,
99% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 39% id,
99% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 38% id,
99% cov

More...

MA_RS07185 MA1385 WP_011021402.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 43% id,
92% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 42% id,
93% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 40% id,
93% cov

More...

MA_RS04795 MA0925 WP_048064998.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 39% id,
99% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 38% id,
99% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

 41% id,
92% cov

More...

ilvE MA_RS22735 MA4349 WP_048065968.1: branched-chain-amino-acid transaminase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 41% id,
91% cov

hisC MA_RS00615 MA0118 WP_048064817.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 34% id,
98% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 31% id,
97% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 26% id,
93% cov

More...

cobD MA_RS04895 MA0942 WP_011020980.1: threonine-phosphate decarboxylase CobD
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 27% id,
99% cov

AAT_MUSP7 / C6C2Z3: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Musicola paradisiaca

 23% id,
88% cov

PAT_PINPS / Q5F4K8: Aspartate aminotransferase; PpAAT; EC 2.6.1.1 from Pinus pinaster
Q5F4K8: aspartate transaminase (EC 2.6.1.1) from Pinus pinaster

 25% id,
72% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory