Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanosarcina acetivorans C2A (GCF_000007345.1)

Found 1 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit D' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanosarcina acetivorans C2A, or try another query

gatD MA_RS06825 MA1317 WP_011021336.1: Glu-tRNA(Gln) amidotransferase subunit GatD
is similar to:
PaperBLAST

gatD / O26802: glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

49% id,
94% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory