Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.31' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

MCA_RS08650 MCA1756 WP_010961010.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

amaB / Q88CC3: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Pseudomonas putida

32% id,
92% cov

SMc04385: L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) from Sinorhizobium meliloti

32% id,
88% cov

AL7A1_MOUSE / Q9DBF1: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Mus musculus
Q9DBF1: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Mus musculus

29% id,
88% cov

More...

MCA_RS09250 MCA1883 WP_041361153.1: non-ribosomal peptide synthetase
is similar to:
PaperBLAST

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

27% id,
55% cov

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis

26% id,
48% cov

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

26% id,
45% cov

More...

MCA_RS10300 MCA2107 WP_228370177.1: Pls/PosA family non-ribosomal peptide synthetase
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

28% id,
45% cov

Q4L235: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Homo sapiens

27% id,
43% cov

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

26% id,
44% cov

More...

MCA_RS07725 MCA1569 WP_010960838.1: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

28% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory