Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 15 curated entries in PaperBLAST's database that match '2.7.1.12' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

aroK MCA_RS01625 MCA0330 WP_010959691.1: shikimate kinase AroK
is similar to:
PaperBLAST

IDNK / Q5T6J7: gluconokinase monomer (EC 2.7.1.12) from Homo sapiens
Q5T6J7: gluconokinase (EC 2.7.1.12) from Homo sapiens

29% id,
53% cov

RR42_RS06130: Gluconokinase (EC 2.7.1.12) from Cupriavidus basilensis

53% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory