Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 22 curated entries in PaperBLAST's database that match '2.7.2.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

proB MCA_RS11005 MCA2249 WP_010961479.1: glutamate 5-kinase
is similar to:
PaperBLAST

Ga0059261_3512: glutamate 5-kinase (EC 2.7.2.11) from Sphingomonas koreensis

44% id,
97% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

42% id,
99% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

39% id,
97% cov

More...

MCA_RS09240 MCA1880 WP_010961132.1: glutamate-5-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

40% id,
56% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

39% id,
56% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

38% id,
55% cov

More...

MCA_RS01930 MCA0390 WP_010959750.1: aspartate kinase
is similar to:
PaperBLAST

CA265_RS20855: glutamate 5-kinase (EC 2.7.2.11) from Pedobacter sp.

23% id,
88% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

26% id,
49% cov

PROB_YEAST / P32264: Glutamate 5-kinase; GK; Gamma-glutamyl kinase; EC 2.7.2.11 from Saccharomyces cerevisiae
P32264: glutamate 5-kinase (EC 2.7.2.11) from Saccharomyces cerevisiae

41% id,
9% cov

pyrH MCA_RS02825 MCA0569 WP_010959917.1: UMP kinase
is similar to:
PaperBLAST

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

26% id,
51% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

24% id,
28% cov

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

31% id,
15% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory