Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 241 curated entries in PaperBLAST's database that match '3.2.1.26' as complete word(s).

These curated entries have 195 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

985643-988297 (frame -1) on NC_002977.6 Methylococcus capsulatus str. Bath, complete sequence
is similar to:
PaperBLAST

ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum

26% id,
46% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory