Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 6 curated entries in PaperBLAST's database that match '3.5.1.53' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

MCA_RS09150 MCA1862 WP_010961114.1: carbon-nitrogen hydrolase
is similar to:
PaperBLAST

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

56% id,
100% cov

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC 3.5.1.53) from Pseudomonas aeruginosa

42% id,
97% cov

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC 3.5.1.53 from Solanum lycopersicum

43% id,
95% cov

More...

MCA_RS01885 MCA0381 WP_010959741.1: carbon-nitrogen hydrolase family protein
is similar to:
PaperBLAST

Q5KR04: N-carbamoylputrescine amidase (EC 3.5.1.53) from Selenomonas ruminantium

25% id,
97% cov

aguB / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC 3.5.1.53) from Campylobacter jejuni

23% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory