Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 10 curated entries in PaperBLAST's database that match '4.1.2.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

MCA_RS03950 MCA0799 WP_010960125.1: methylthioribulose 1-phosphate dehydratase
is similar to:
PaperBLAST

BT1274: L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase from Bacteroides thetaiotaomicron

28% id,
74% cov

BWI76_RS22915: L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis

33% id,
46% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory