Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylococcus capsulatus str. Bath (GCF_000008325.1)

Found 22 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methylococcus capsulatus str. Bath, or try another query

gcvH MCA_RS00255 MCA0051 WP_010959423.1: glycine cleavage system protein GcvH
is similar to:
PaperBLAST

GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli
Gcv / b2904: glycine cleavage system H protein from Escherichia coli
gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli

57% id,
99% cov

GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus

57% id,
98% cov

PfGW456L13_1869: glycine cleavage system H protein (EC 1.4.1.27) from Pseudomonas fluorescens

47% id,
90% cov

More...

aceF MCA_RS14720 MCA3001 WP_010962190.1: dihydrolipoyllysine-residue acetyltransferase
is similar to:
PaperBLAST

gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.

42% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory