Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanothermobacter thermautotrophicus str. Delta H (GCF_000008645.1)

Found 24 curated entries in PaperBLAST's database that match '1.2.1.11' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanothermobacter thermautotrophicus str. Delta H, or try another query

asd MTH_RS03755 MTH799 WP_010876434.1: aspartate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC 1.2.1.11) from Methanocaldococcus jannaschii

58% id,
96% cov

C5GC63: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Blastomyces dermatitidis

45% id,
95% cov

Q5KPK7: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) from Cryptococcus neoformans

44% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

727911-728960 (frame -3) on NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H, complete sequence
is similar to:
PaperBLAST

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC 1.2.1.11) from Methanocaldococcus jannaschii
Also see hits to annotated proteins above

58% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory