Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanothermobacter thermautotrophicus str. Delta H (GCF_000008645.1)

Found 38 curated entries in PaperBLAST's database that match '2.7.6.1' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Methanothermobacter thermautotrophicus str. Delta H, or try another query

MTH_RS03680 MTH784 WP_010876421.1: ribose-phosphate diphosphokinase
is similar to:		 PaperBLAST

KPRS_METJA / Q58761: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Methanocaldococcus jannaschii
Q58761: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Methanocaldococcus jannaschii

 41% id,
100% cov

Q97Z86: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Saccharolobus solfataricus

 39% id,
99% cov

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

 42% id,
90% cov

More...

hpt MTH_RS06300 MTH1320 WP_048061024.1: hypoxanthine/guanine phosphoribosyltransferase
is similar to:		 PaperBLAST

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

 25% id,
50% cov

A3MV85: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Pyrobaculum calidifontis

 24% id,
41% cov

purF MTH_RS03010 MTH646 WP_048060868.1: amidophosphoribosyltransferase
is similar to:		 PaperBLAST

A0R3C8: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Mycolicibacterium smegmatis

 24% id,
49% cov

MTH_RS04135 MTH876 WP_010876509.1: orotate phosphoribosyltransferase-like protein
is similar to:		 PaperBLAST

KPRS_METJA / Q58761: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Methanocaldococcus jannaschii
Q58761: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Methanocaldococcus jannaschii

 26% id,
42% cov

KPRS_THEKO / O52958: Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 from Thermococcus kodakarensis

 33% id,
31% cov

A0R3C8: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Mycolicibacterium smegmatis

 29% id,
34% cov

More...

pyrE MTH_RS08910 MTH1860 WP_010877462.1: orotate phosphoribosyltransferase
is similar to:		 PaperBLAST

A3MV85: ribose-phosphate diphosphokinase (EC 2.7.6.1) from Pyrobaculum calidifontis

 28% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory