Searching in Methanothermobacter thermautotrophicus str. Delta H (GCF_000008645.1)
Found 2 curated entries in PaperBLAST's database that match 'carbamoyl-phosphate synthetase%large' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Methanothermobacter thermautotrophicus str. Delta H, or try another query
| MTH_RS04480 MTH947 WP_013296134.1: ATP-grasp domain-containing protein is similar to: | PaperBLAST |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 22% id, 33% cov |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 21% id, 24% cov |
| MTH_RS09205 MTH1917 WP_010877513.1: acetyl-CoA carboxylase biotin carboxylase subunit is similar to: | PaperBLAST |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 23% id, 27% cov |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 23% id, 27% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 907411-909906 (frame -2) on NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H, complete sequence is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 54% id, 77% cov |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 52% id, 78% cov |
| 909899-910648 (frame -1) on NC_000916.1 Methanothermobacter thermautotrophicus str. Delta H, complete sequence is similar to: | PaperBLAST |
pyrAB / P25994: pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis | 60% id, 22% cov |
carB / P00968: carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli | 56% id, 22% cov |
Lawrence Berkeley National Laboratory