Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium acetobutylicum ATCC 824 (GCF_000008765.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Clostridium acetobutylicum ATCC 824, or try another query

CA_RS09440 CA_C1819 WP_010965125.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 51% id,
99% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 49% id,
99% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 48% id,
99% cov

More...

CA_RS12220 CA_C2380 WP_014518980.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

aspB-2 / P14909: aspartate aminotransferase subunit (EC 2.6.1.1) from Saccharolobus solfataricus
P14909: aspartate transaminase (EC 2.6.1.1) from Saccharolobus solfataricus

 37% id,
96% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

 36% id,
97% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 34% id,
99% cov

More...

CA_RS00095 CA_C0014 WP_010963343.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 40% id,
88% cov

CA_RS02125 CA_C0375 WP_010963697.1: aminotransferase A
is similar to:		 PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 36% id,
99% cov

AAT_RHIME / P58350: Aspartate aminotransferase; AAT; AspAT; Putative 2-aminoadipate transaminase; Transaminase A; EC 2.6.1.1; EC 2.6.1.39 from Rhizobium meliloti

 36% id,
98% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

 36% id,
96% cov

More...

CA_RS01235 CA_C0221 WP_010963544.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 35% id,
97% cov

CA_RS08910 CA_C1715 WP_010965022.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 35% id,
94% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 30% id,
100% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 30% id,
99% cov

More...

CA_RS05325 CA_C1001 WP_010964319.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 31% id,
100% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

 31% id,
98% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 30% id,
99% cov

More...

CA_RS14570 CA_C2832 WP_010966117.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 30% id,
98% cov

AAPAT_THET8 / Q56232: Aspartate/prephenate aminotransferase; AspAT / PAT; Transaminase A; EC 2.6.1.1; EC 2.6.1.78 from Thermus thermophilus
aspC / RF|YP_143312.1: aspartate transaminase; EC 2.6.1.1 from Thermus thermophilus

 31% id,
91% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 29% id,
95% cov

More...

hisC CA_RS15580 CA_C3031 WP_010966312.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 29% id,
99% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 24% id,
77% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 22% id,
77% cov

CA_RS15275 CA_C2970 WP_010966253.1: MalY/PatB family protein
is similar to:		 PaperBLAST

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 29% id,
93% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 25% id,
92% cov

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

 25% id,
92% cov

More...

CA_RS12065 CA_C2354 WP_010965651.1: aminotransferase class V-fold PLP-dependent enzyme
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 26% id,
86% cov

CA_RS11785 CA_C2297 WP_010965594.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 21% id,
94% cov

ARO9 / P38840: aromatic amino acid aminotransferase II (EC 2.6.1.1; EC 2.6.1.58; EC 2.6.1.28) from Saccharomyces cerevisiae

 24% id,
65% cov

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

 28% id,
43% cov

CA_RS18780 CA_C3651 WP_010966913.1: PLP-dependent aminotransferase family protein
is similar to:		 PaperBLAST

Tat / P04694: tyrosine aminotransferase subunit (EC 2.6.1.1) from Rattus norvegicus

 25% id,
65% cov

TAT / P17735: Tyrosine aminotransferase (EC 2.6.1.1) from Homo sapiens

 24% id,
65% cov

atrD / B7STY2: L-tyrosine:2-oxoglutarate aminotransferase (EC 2.6.1.1) from Tapinella panuoides

 22% id,
52% cov

CA_RS11440 CA_C2226 WP_014518967.1: aminotransferase class IV
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 30% id,
44% cov

CA_RS11480 CA_C2234 WP_010965532.1: cysteine desulfurase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 25% id,
42% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1147147-1148343 (frame -3) on NC_003030.1 Clostridium acetobutylicum ATCC 824, complete sequence
is similar to:		 PaperBLAST

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum
Also see hits to annotated proteins above

 31% id,
99% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory