Curated BLAST for Genomes

 

Curated BLAST

Searching in Clostridium acetobutylicum ATCC 824 (GCF_000008765.1)

Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Clostridium acetobutylicum ATCC 824, or try another query

CA_RS02195 CA_C0390 WP_010963712.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

44% id,
89% cov

CA_RS02200 CA_C0391 WP_010963713.1: PLP-dependent aspartate aminotransferase family protein
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

43% id,
89% cov

CA_RS04950 CA_C0930 WP_010964248.1: bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

42% id,
88% cov

CA_RS00560 CA_C0102 WP_010963429.1: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

31% id,
89% cov

CA_RS14325 CA_C2783 WP_010966068.1: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

32% id,
67% cov

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

36% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory