Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium johnstonii 3841 (GCF_000009265.1)

Found 4 curated entries in PaperBLAST's database that match '1.1.1.57' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhizobium johnstonii 3841, or try another query

RL_RS00525 RL0098 WP_011649922.1: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

UxuB / b4323: D-mannonate oxidoreductase (EC 1.1.1.57) from Escherichia coli
uxuB / P39160: D-mannonate oxidoreductase (EC 1.1.1.57) from Escherichia coli

45% id,
91% cov

RL_RS21725 RL4214 WP_011653611.1: mannitol dehydrogenase family protein
is similar to:
PaperBLAST

UxuB / b4323: D-mannonate oxidoreductase (EC 1.1.1.57) from Escherichia coli
uxuB / P39160: D-mannonate oxidoreductase (EC 1.1.1.57) from Escherichia coli

37% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory