Searching in Rhizobium johnstonii 3841 (GCF_000009265.1)
Found 44 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).
These curated entries have 32 distinct sequences.
Running ublast with E ≤ 0.01
Found 14 relevant proteins in Rhizobium johnstonii 3841, or try another query
| RL_RS04110 RL0784 WP_011650533.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 51% id, 100% cov |
DAO_BRADU / Q89F89: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Bradyrhizobium diazoefficiens | 28% id, 99% cov |
DAO_STRCO / Q9X7P6: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Streptomyces coelicolor | 31% id, 24% cov |
| RL_RS02500 RL0477 WP_041936154.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
DAO_BRADU / Q89F89: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Bradyrhizobium diazoefficiens | 34% id, 99% cov |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 30% id, 98% cov |
| RL_RS35000 pRL120417 WP_011649182.1: D-amino acid dehydrogenase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 30% id, 99% cov |
DAO_BRADU / Q89F89: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Bradyrhizobium diazoefficiens | 28% id, 98% cov |
DAO_GLUPR / Q7X2D3: D-amino-acid oxidase; DAAO; DAMOX; DAO; GpDAAO-1; GpDAAO-2; EC 1.4.3.3 from Glutamicibacter protophormiae | 38% id, 16% cov |
| RL_RS15090 RL2917 WP_011652438.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
DAO_BRADU / Q89F89: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Bradyrhizobium diazoefficiens | 28% id, 92% cov |
OXDA_TRIVR / Q99042: D-amino-acid oxidase; DAAO; DAMOX; DAO; TvDAO1; EC 1.4.3.3 from Trigonopsis variabilis | 30% id, 39% cov |
DAO_GLUPR / Q7X2D3: D-amino-acid oxidase; DAAO; DAMOX; DAO; GpDAAO-1; GpDAAO-2; EC 1.4.3.3 from Glutamicibacter protophormiae | 40% id, 18% cov |
| RL_RS32585 pRL110560 WP_011655286.1: sarcosine oxidase subunit beta family protein is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 25% id, 98% cov |
| RL_RS18490 RL3589 WP_011653059.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 25% id, 89% cov |
| RL_RS35940 pRL120605 WP_011649364.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 26% id, 82% cov |
DAO_STRCO / Q9X7P6: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Streptomyces coelicolor | 31% id, 46% cov |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 30% id, 26% cov |
| RL_RS36020 pRL120621 WP_011649380.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
DAO_BRADU / Q89F89: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Bradyrhizobium diazoefficiens | 22% id, 78% cov |
| RL_RS07105 RL1363 WP_011651072.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 31% id, 36% cov |
| RL_RS40855 pRL100253 WP_011654286.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
DAO_BRADU / Q89F89: D-amino-acid oxidase; DAAO; DAMOX; DAO; EC 1.4.3.3 from Bradyrhizobium diazoefficiens | 40% id, 28% cov |
| RL_RS03445 RL0654 WP_011650431.1: MSMEG_0569 family flavin-dependent oxidoreductase is similar to: | PaperBLAST |
thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis | 26% id, 27% cov |
| RL_RS36585 pRL120735 WP_011649488.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 33% id, 21% cov |
| RL_RS23115 RL4485 WP_011653850.1: FAD-dependent oxidoreductase is similar to: | PaperBLAST |
Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 40% id, 15% cov |
OXDA_TRIVR / Q99042: D-amino-acid oxidase; DAAO; DAMOX; DAO; TvDAO1; EC 1.4.3.3 from Trigonopsis variabilis | 40% id, 15% cov |
| RL_RS23625 RL4586 WP_011653939.1: FAD-binding oxidoreductase is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 33% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory