Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium johnstonii 3841 (GCF_000009265.1)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Rhizobium johnstonii 3841, or try another query

RL_RS10270 RL1979 WP_011651596.1: cysteine synthase A
is similar to:
PaperBLAST

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

78% id,
99% cov

CYSK_SCHPO / O59701: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Schizosaccharomyces pombe

54% id,
91% cov

CYSK_EMENI / P50867: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Emericella nidulans
cysB / GB|AAC06128.1: cysteine synthase; EC 2.5.1.47 from Emericella nidulans

53% id,
90% cov

More...

cysK RL_RS01775 RL0340 WP_011650142.1: cysteine synthase A
is similar to:
PaperBLAST

C4ITG6: cysteine synthase (EC 2.5.1.47) from Brucella abortus

79% id,
93% cov

Q2PZM5: cysteine synthase (EC 2.5.1.47) from Azospirillum brasilense

69% id,
99% cov

CYSK_MYCTU / P9WP55: O-acetylserine sulfhydrylase; OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase; EC 2.5.1.47 from Mycobacterium tuberculosis
P9WP55: cysteine synthase (EC 2.5.1.47) from Mycobacterium tuberculosis

63% id,
98% cov

More...

RL_RS08715 RL1679 WP_011651352.1: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

43% id,
98% cov

RL_RS24215 RL4706 WP_028742675.1: pyridoxal-phosphate dependent enzyme
is similar to:
PaperBLAST

P45040: cysteine synthase (EC 2.5.1.47) from Haemophilus influenzae

29% id,
90% cov

CYSK_SALTY / P0A1E3: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; EC 2.5.1.47 from Salmonella typhimurium
P0A1E3: cysteine synthase (EC 2.5.1.47) from Salmonella enterica

26% id,
83% cov

CYSK_SYNE7 / Q59966: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase; EC 2.5.1.47 from Synechococcus elongatus

26% id,
85% cov

More...

RL_RS11430 RL2205 WP_011651802.1: cystathionine beta-lyase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

30% id,
52% cov

RL_RS34520 pRL120318 WP_041936994.1: PLP-dependent transferase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

32% id,
48% cov

RL_RS02910 RL0554 WP_011650342.1: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

33% id,
46% cov

RL_RS31590 pRL110363 WP_011655105.1: PLP-dependent transferase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

30% id,
50% cov

RL_RS34795 pRL120373 WP_003550455.1: cystathionine gamma-synthase family protein
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

32% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory