Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium johnstonii 3841 (GCF_000009265.1)

Found 14 curated entries in PaperBLAST's database that match '3.2.1.48' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Rhizobium johnstonii 3841, or try another query

RL_RS03920 RL0748 WP_011650502.1: alpha glucosidase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

65% id,
94% cov

RL_RS18240 RL3542 WP_011653014.1: alpha-glucosidase family protein
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

57% id,
94% cov

RL_RS35695 pRL120559 WP_011649319.1: beta-fructofuranosidase
is similar to:
PaperBLAST

AO356_28590: sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

32% id,
99% cov

Pf6N2E2_1650: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

33% id,
93% cov

Pf1N1B4_5116: Sucrose alpha-glucosidase (EC 3.2.1.48) from Pseudomonas fluorescens

33% id,
89% cov

treS RL_RS36460 pRL120709 WP_011649462.1: maltose alpha-D-glucosyltransferase
is similar to:
PaperBLAST

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

45% id,
42% cov

Q6UVM5: sucrose alpha-glucosidase (EC 3.2.1.48) from Xanthomonas axonopodis

31% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory