Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhizobium johnstonii 3841 (GCF_000009265.1)

Found 18 curated entries in PaperBLAST's database that match '4.2.1.49' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhizobium johnstonii 3841, or try another query

RL_RS30795 pRL110203 WP_003548647.1: urocanate hydratase
is similar to:
PaperBLAST

SM_b21163: Urocanate hydratase (EC 4.2.1.49) from Sinorhizobium meliloti

93% id,
100% cov

PGA1_c36320: Urocanate hydratase (EC 4.2.1.49) from Phaeobacter inhibens

84% id,
100% cov

Ga0059261_3961: Urocanate hydratase (EC 4.2.1.49) from Sphingomonas koreensis

81% id,
99% cov

More...

RL_RS01900 RL0364 WP_011650166.1: urocanate hydratase
is similar to:
PaperBLAST

HUTU_GEOKA / Q5L084: Urocanate hydratase; Urocanase; Imidazolonepropionate hydrolase; EC 4.2.1.49 from Geobacillus kaustophilus

52% id,
98% cov

Ga0059261_3961: Urocanate hydratase (EC 4.2.1.49) from Sphingomonas koreensis

53% id,
96% cov

SM_b21163: Urocanate hydratase (EC 4.2.1.49) from Sinorhizobium meliloti

50% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory