Searching in Rhizobium johnstonii 3841 (GCF_000009265.1)
Found 6 curated entries in PaperBLAST's database that match '5.1.1.5' as complete word(s).
These curated entries have 4 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Rhizobium johnstonii 3841, or try another query
| alr RL_RS34995 pRL120416 WP_011649181.1: alanine racemase is similar to: | PaperBLAST |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 25% id, 87% cov |
| alr RL_RS08040 RL1550 WP_011651239.1: alanine racemase is similar to: | PaperBLAST |
LYR_PROMI / M4GGR9: Lysine racemase; EC 5.1.1.5 from Proteus mirabilis | 25% id, 83% cov |
| argC RL_RS08660 RL1668 WP_011651343.1: N-acetyl-gamma-glutamyl-phosphate reductase is similar to: | PaperBLAST |
C7ACH5: lysine racemase (EC 5.1.1.5) from uncultured bacterium | 32% id, 31% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1617764-1618951 (frame -3) on NC_008380.1 Rhizobium johnstonii 3841, complete sequence is similar to: | PaperBLAST |
LYSR_OENOB / Q04HB7: Lysine racemase; EC 5.1.1.5 from Oenococcus oeni | 25% id, 97% cov |
Lawrence Berkeley National Laboratory