Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 12 curated entries in PaperBLAST's database that match '1.1.1.203'.

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS00320 amb0063 WP_043742990.1: UDP-glucose 4-epimerase
is similar to:
PaperBLAST

URODH_AGRFC / Q7CRQ0: Uronate dehydrogenase; D-galacturonate dehydrogenase; D-glucuronate dehydrogenase; Hexuronate dehydrogenase; EC 1.1.1.203 from Agrobacterium fabrum
udh / Q7CRQ0: D-uronate dehydrogenase moomer (EC 1.1.1.203) from Agrobacterium fabrum
Q7CRQ0: uronate dehydrogenase (EC 1.1.1.203) from Agrobacterium tumefaciens

29% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory