Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 30 curated entries in PaperBLAST's database that match '1.1.1.307' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS01300 amb0256 WP_011382703.1: aldo/keto reductase
is similar to:
PaperBLAST

F2YCN5: D-xylose reductase (EC 1.1.1.307) from Zymomonas mobilis

28% id,
92% cov

AMB_RS12345 amb2456 WP_011384837.1: aldo/keto reductase
is similar to:
PaperBLAST

C5J3R6: D-xylose reductase (EC 1.1.1.307) from Rasamsonia emersonii

25% id,
91% cov

A0A0S2PJI4: D-xylose reductase (EC 1.1.1.307) from Spathaspora passalidarum

31% id,
49% cov

A0A455KZK8: D-xylose reductase (EC 1.1.1.307) from Thermomyces lanuginosus

27% id,
50% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory