Curated BLAST for Genomes


Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 4 curated entries in PaperBLAST's database that match ''.

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS18155 amb3587 WP_011385945.1: 3-hydroxyisobutyrate dehydrogenase
is similar to:

Q8ZLV8: 2-hydroxy-3-oxopropionate reductase (EC from Salmonella enterica

33% id,
94% cov

GARR_ECOLI / P0ABQ2: 2-hydroxy-3-oxopropionate reductase; Tartronate semialdehyde reductase; TSAR; EC from Escherichia coli
YhaE / b3125: tartronate semialdehyde reductase (EC from Escherichia coli
garR / P0ABQ2: tartronate semialdehyde reductase (EC from Escherichia coli

33% id,
95% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory