Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS00455 amb0090 WP_011382537.1: oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

29% id,
94% cov

fabI AMB_RS21370 amb4226 WP_011386575.1: enoyl-ACP reductase FabI
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
97% cov

AMB_RS00675 amb0134 WP_011382581.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
94% cov

AMB_RS10870 amb2150 WP_011384549.1: SDR family oxidoreductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
93% cov

phbB AMB_RS04300 amb0843 WP_043743408.1: acetoacetyl-CoA reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
92% cov

AMB_RS23050 amb4555 WP_011386899.1: quinone oxidoreductase
is similar to:
PaperBLAST

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

27% id,
41% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

27% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory