Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 87 curated entries in PaperBLAST's database that match '1.1.1.9'.

These curated entries have 67 distinct sequences.

Running ublast with E ≤ 0.01

Found 29 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS16020 amb3176 WP_011385541.1: tartrate dehydrogenase
is similar to:
PaperBLAST

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

52% id,
99% cov

TTUC_PSEPU / Q51945: Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida

49% id,
97% cov

AMB_RS16130 amb3193 WP_011385558.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

serA / GB|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis

43% id,
99% cov

Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor

40% id,
97% cov

P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis

40% id,
97% cov

More...

AMB_RS04485 amb0880 WP_011383322.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

39% id,
98% cov

AMB_RS10625 amb2106 WP_011384506.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

33% id,
100% cov

AMB_RS00675 amb0134 WP_011382581.1: KR domain-containing protein
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

33% id,
100% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
98% cov

AMB_RS13020 amb2587 WP_011384968.1: KR domain-containing protein
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

33% id,
98% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

31% id,
98% cov

AMB_RS13035 amb2590 WP_011384971.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

32% id,
99% cov

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

31% id,
98% cov

AMB_RS10835 amb2144 WP_043744206.1: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q2Z1W3: aryl-alcohol dehydrogenase (EC 1.1.1.90) from Rhodococcus erythropolis

32% id,
96% cov

M5AJW4: coniferyl-alcohol dehydrogenase (EC 1.1.1.194); aryl-alcohol dehydrogenase (EC 1.1.1.90) from Streptomyces sp.

31% id,
97% cov

S6BFC0: D-xylulose reductase (EC 1.1.1.9) from Rhizomucor pusillus

26% id,
92% cov

More...

AMB_RS20570 amb4069 WP_011386420.1: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli
dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli

31% id,
99% cov

TTUC_PSEPU / Q51945: Tartrate dehydrogenase/decarboxylase; TDH; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.93; EC 4.1.1.73; EC 1.1.1.83 from Pseudomonas putida

30% id,
98% cov

AMB_RS08070 amb1599 WP_011384008.1: NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

32% id,
96% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

25% id,
97% cov

AMB_RS00985 amb0195 WP_043743064.1: D-glycerate dehydrogenase
is similar to:
PaperBLAST

O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii

34% id,
85% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

26% id,
96% cov

Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis

26% id,
82% cov

More...

AMB_RS10870 amb2150 WP_011384549.1: KR domain-containing protein
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
100% cov

AMB_RS13470 amb2677 WP_011385057.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

29% id,
98% cov

AMB_RS18130 amb3582 WP_011385940.1: KR domain-containing protein
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

30% id,
96% cov

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

36% id,
71% cov

AMB_RS01425 amb0281 WP_011382728.1: bifunctional aldolase/short-chain dehydrogenase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

29% id,
97% cov

AMB_RS12070 amb2390 WP_011384786.1: NADP-dependent 3-hydroxy acid dehydrogenase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

30% id,
90% cov

AMB_RS00685 amb0136 WP_011382583.1: phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli
SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
serA / RF|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli
serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli
P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli

36% id,
69% cov

Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii

30% id,
82% cov

U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii

35% id,
64% cov

More...

AMB_RS21370 amb4226 WP_011386575.1: enoyl-[acyl-carrier-protein] reductase FabI
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

25% id,
98% cov

AMB_RS04300 amb0843 WP_043743408.1: beta-ketoacyl-ACP reductase
is similar to:
PaperBLAST

C0IR58: aryl-alcohol dehydrogenase (NADP+) (EC 1.1.1.91) from Ralstonia sp.

25% id,
97% cov

AMB_RS03860 amb0752 WP_011383195.1: NADPH:quinone oxidoreductase family protein
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

27% id,
84% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

25% id,
82% cov

HSERO_RS17015: sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9) from Herbaspirillum seropedicae

27% id,
72% cov

More...

AMB_RS23050 amb4555 WP_011386899.1: quinone oxidoreductase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

30% id,
75% cov

xylB / P39849: benzyl alcohol dehydrogenase subunit (EC 1.1.1.90) from Pseudomonas putida
P39849: aryl-alcohol dehydrogenase (EC 1.1.1.90) from Pseudomonas putida

44% id,
23% cov

DHSO1_YEAST / P35497: Sorbitol dehydrogenase 1; SDH 1; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.9 from Saccharomyces cerevisiae

36% id,
25% cov

More...

AMB_RS10540 amb2088 WP_011384488.1: KR domain-containing protein
is similar to:
PaperBLAST

Q8GR61: D-xylulose reductase (EC 1.1.1.9) from Gluconobacter oxydans

30% id,
73% cov

AMB_RS07830 amb1550 WP_011383960.1: NADP-dependent oxidoreductase
is similar to:
PaperBLAST

M5AJW4: coniferyl-alcohol dehydrogenase (EC 1.1.1.194); aryl-alcohol dehydrogenase (EC 1.1.1.90) from Streptomyces sp.

29% id,
68% cov

Q2K0Q7: D-xylulose reductase (EC 1.1.1.9) from Rhizobium etli

25% id,
73% cov

DHSO_MOUSE / Q64442: Sorbitol dehydrogenase; SDH; SORD; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Mus musculus

25% id,
72% cov

More...

AMB_RS01300 amb0256 WP_011382703.1: aldo/keto reductase
is similar to:
PaperBLAST

yvgN / O32210: glyoxal/methylglyoxal reductase (EC 1.1.1.283; EC 1.1.1.91) from Bacillus subtilis

26% id,
64% cov

AMB_RS01565 amb0309 WP_011382756.1: crotonyl-CoA carboxylase/reductase
is similar to:
PaperBLAST

Q59545: xylitol dehydrogenase (EC 1.1.1.9) from Morganella morganii

23% id,
72% cov

AMB_RS00205 amb0040 WP_011382487.1: threonine dehydrogenase
is similar to:
PaperBLAST

DHSO_SHEEP / P07846: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Ovis aries

29% id,
40% cov

DHSO_BOVIN / Q58D31: Sorbitol dehydrogenase; SDH; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bos taurus

29% id,
40% cov

DHSO_HUMAN / Q00796: Sorbitol dehydrogenase; SDH; (R,R)-butanediol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Ribitol dehydrogenase; RDH; Xylitol dehydrogenase; XDH; EC 1.1.1.-; EC 1.1.1.4; EC 1.1.1.14; EC 1.1.1.56; EC 1.1.1.9 from Homo sapiens

30% id,
38% cov

AMB_RS11140 amb2201 WP_011384599.1: 5-(carboxyamino)imidazole ribonucleotide synthase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

36% id,
26% cov

AMB_RS18795 amb3713 WP_043745229.1: FAD-binding oxidoreductase
is similar to:
PaperBLAST

HSERO_RS19500: Putative phosphoglycerate dehydrogenase (EC:1.1.1.95) from Herbaspirillum seropedicae

36% id,
11% cov

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

36% id,
11% cov

AMB_RS13160 amb2615 WP_011384996.1: electron transport complex subunit RsxC
is similar to:
PaperBLAST

BPHYT_RS03150: Phosphoglycerate dehydrogenase (EC:1.1.1.95) from Burkholderia phytofirmans

24% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 26 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

4413670-4414788 (frame -1) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

GpsA / b3608: glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) from Escherichia coli
gpsA / P0A6S7: glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) from Escherichia coli

46% id,
74% cov

GPDA_BACSU / P46919: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; NAD(P)H-dependent dihydroxyacetone-phosphate reductase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; EC 1.1.1.94 from Bacillus subtilis

41% id,
75% cov

GPDA_STRP6 / Q5XE03: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; EC 1.1.1.94 from Streptococcus pyogenes

40% id,
76% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory