Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 15 curated entries in PaperBLAST's database that match '1.1.2.8' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
AMB_RS06810 amb1343 WP_011383753.1: pyrrolo-quinoline quinone is similar to: | PaperBLAST |
QEDH_PSEAE / Q9Z4J7: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); EC 1.1.2.8 from Pseudomonas aeruginosa | 26% id, 51% cov |
B1N7J5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida | 30% id, 29% cov |
Q88JH5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Pseudomonas putida | 27% id, 28% cov |
AMB_RS22080 amb4365 WP_011386712.1: cytochrome-c oxidase, cbb3-type subunit III is similar to: | PaperBLAST |
C9K502: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 42% id, 8% cov |
D2SZY5: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 42% id, 8% cov |
C7G3B8: alcohol dehydrogenase (cytochrome c) (EC 1.1.2.8) from Acetobacter pasteurianus | 39% id, 8% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
1839480-1842650 (frame -2) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome is similar to: | PaperBLAST |
QEDH_PSEAE / Q9Z4J7: Quinoprotein ethanol dehydrogenase; QEDH; Quinoprotein alcohol dehydrogenase (cytochrome c); Quinoprotein alcohol dehydrogenase (cytochrome c550); EC 1.1.2.8 from Pseudomonas aeruginosa | 27% id, 18% cov |
Lawrence Berkeley National Laboratory