Curated BLAST for Genomes


Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 7 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS22540 amb4454 WP_011386798.1: alpha-hydroxy acid oxidase
is similar to:

Q8Z0C8: L-lactate oxidase (EC from Nostoc sp.

35% id,
99% cov

F8WQN2: L-lactate oxidase (EC from Chlamydomonas reinhardtii

34% id,
91% cov

Q44467: L-lactate dehydrogenase (EC; L-lactate oxidase (EC from Aerococcus viridans

36% id,
46% cov


AMB_RS13120 amb2607 WP_043744513.1: nitronate monooxygenase
is similar to:

F8WQN2: L-lactate oxidase (EC from Chlamydomonas reinhardtii

31% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory