Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 163 curated entries in PaperBLAST's database that match '1.13.11.5'.
These curated entries have 126 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS01310 amb0258 WP_011382705.1: class III extradiol dioxygenase family protein is similar to: | PaperBLAST |
PmdB / Q8RNX9: protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 44% id, 100% cov |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 43% id, 66% cov |
GALA_PSEPK / Q88JX5: Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida | 37% id, 58% cov |
| AMB_RS01305 amb0257 WP_011382704.1: protocatechuate 4,5-dioxygenase subunit alpha is similar to: | PaperBLAST |
PmdA / Q8RNY0: protocatechuate 4,5-dioxygenase α subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni | 39% id, 73% cov |
desB / Q5NTE5: gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis | 26% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory