Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 101 curated entries in PaperBLAST's database that match '1.2.1.10'.

These curated entries have 73 distinct sequences.

Running ublast with E ≤ 0.01

Found 35 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS11710 amb2317 WP_011384714.1: pyruvate dehydrogenase complex E1 component subunit beta
is similar to:
PaperBLAST

Q38799: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Arabidopsis thaliana

69% id,
91% cov

P52904: pyruvate dehydrogenase system (subunit 3/3) (EC 1.2.1.104) from Pisum sativum

66% id,
93% cov

G0RYE0: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Chaetomium thermophilum

62% id,
92% cov

More...

lpdA AMB_RS20050 amb3963 WP_011386317.1: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

62% id,
93% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens
A0A024R713: 2-oxoglutarate dehydrogenase system (subunit 3/3) (EC 1.2.1.105) from Homo sapiens

56% id,
92% cov

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

43% id,
99% cov

More...

odhB AMB_RS20045 amb3962 WP_011386316.1: 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
is similar to:
PaperBLAST

P0AFG6: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); dihydrolipoyllysine-residue succinyltransferase (EC 2.3.1.61) from Escherichia coli

53% id,
100% cov

P36957: 2-oxoglutarate dehydrogenase system (subunit 2/3) (EC 1.2.1.105) from Homo sapiens

49% id,
84% cov

pdhC / P75392: pyruvate dehydrogenase (EC 1.2.1.104) from Mycoplasma pneumoniae

32% id,
98% cov

More...

AMB_RS20040 amb3961 WP_011386315.1: 2-oxoglutarate dehydrogenase E1 component
is similar to:
PaperBLAST

P0AFG3: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105) from Escherichia coli

45% id,
99% cov

Q9FLH2: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) from Arabidopsis thaliana

50% id,
90% cov

F4IWV2: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); oxoglutarate dehydrogenase (succinyl-transferring) (EC 1.2.4.2) from Arabidopsis thaliana

49% id,
90% cov

More...

argC AMB_RS09075 amb1793 WP_173361910.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

Q5JFW1: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Thermococcus kodakarensis

42% id,
99% cov

lysY / Q4JAQ3: [amino-group carrier protein]-L-2-aminoadipate/[amino-group carrier protein]-L-glutamate phosphate reductase (EC 1.2.1.103; EC 1.2.1.106) from Sulfolobus acidocaldarius
Q4JAQ3: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Sulfolobus acidocaldarius

33% id,
99% cov

pdhA AMB_RS11705 amb2316 WP_011384713.1: pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
is similar to:
PaperBLAST

P52903: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104) from Solanum tuberosum

51% id,
82% cov

P52902: pyruvate dehydrogenase system (subunit 2/3) (EC 1.2.1.104) from Pisum sativum

50% id,
80% cov

P08559: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 2/2) (EC 1.2.4.1) from Homo sapiens

51% id,
79% cov

More...

AMB_RS11715 amb2318 WP_011384715.1: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
is similar to:
PaperBLAST

P20285: pyruvate dehydrogenase system (EC 1.2.1.104) from Neurospora crassa

45% id,
92% cov

O00330: pyruvate dehydrogenase system (subunit 3/5) (EC 1.2.1.104) from Homo sapiens

44% id,
89% cov

Q8RWN9: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104) from Arabidopsis thaliana

46% id,
79% cov

More...

lpdA AMB_RS11730 amb2321 WP_011384718.1: dihydrolipoyl dehydrogenase
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

41% id,
100% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

38% id,
93% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens
A0A024R713: 2-oxoglutarate dehydrogenase system (subunit 3/3) (EC 1.2.1.105) from Homo sapiens

38% id,
92% cov

More...

gap AMB_RS02635 amb0512 WP_011382955.1: type I glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

41% id,
96% cov

AMB_RS00370 amb0073 WP_083763391.1: alpha-ketoacid dehydrogenase subunit alpha/beta
is similar to:
PaperBLAST

P73405: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Synechocystis sp.

33% id,
100% cov

Q38799: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Arabidopsis thaliana

32% id,
89% cov

P52904: pyruvate dehydrogenase system (subunit 3/3) (EC 1.2.1.104) from Pisum sativum

31% id,
89% cov

More...

gor AMB_RS08430 amb1666 WP_011384075.1: glutathione-disulfide reductase
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

32% id,
96% cov

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.2.1.104) from Mycoplasma pneumoniae

30% id,
96% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

29% id,
94% cov

More...

AMB_RS13065 amb2596 WP_011384977.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

FHMCD_RHILO / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase; FHMPC dehydrogenase; EC 1.2.1.100 from Mesorhizobium japonicum
mlr6793 / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase monomer (EC 1.2.1.100) from Mesorhizobium japonicum
Q988C8: 4-pyridoxic acid dehydrogenase (EC 1.1.99.42); 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase (EC 1.2.1.100) from Mesorhizobium japonicum

31% id,
93% cov

AMB_RS19750 amb3902 WP_011386256.1: 3-hydroxybutyryl-CoA dehydrogenase
is similar to:
PaperBLAST

FHMCD_RHILO / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase; FHMPC dehydrogenase; EC 1.2.1.100 from Mesorhizobium japonicum
mlr6793 / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase monomer (EC 1.2.1.100) from Mesorhizobium japonicum
Q988C8: 4-pyridoxic acid dehydrogenase (EC 1.1.99.42); 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase (EC 1.2.1.100) from Mesorhizobium japonicum

30% id,
92% cov

AMB_RS15050 amb2990 WP_011385366.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

FHMCD_RHILO / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase; FHMPC dehydrogenase; EC 1.2.1.100 from Mesorhizobium japonicum
mlr6793 / Q988C8: 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylate 5-dehydrogenase monomer (EC 1.2.1.100) from Mesorhizobium japonicum
Q988C8: 4-pyridoxic acid dehydrogenase (EC 1.1.99.42); 5-formyl-3-hydroxy-2-methylpyridine 4-carboxylic acid 5-dehydrogenase (EC 1.2.1.100) from Mesorhizobium japonicum

28% id,
98% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

21% id,
64% cov

AMB_RS17740 amb3507 WP_011385867.1: acetolactate synthase 3 large subunit
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

24% id,
96% cov

AMB_RS00340 amb0067 WP_011382514.1: transketolase C-terminal domain-containing protein
is similar to:
PaperBLAST

Q9D051: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104) from Mus musculus

24% id,
80% cov

G0RYE0: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Chaetomium thermophilum

26% id,
71% cov

AMB_RS04050 amb0792 WP_011383235.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

22% id,
84% cov

dxs AMB_RS14615 amb2904 WP_011385281.1: 1-deoxy-D-xylulose-5-phosphate synthase
is similar to:
PaperBLAST

P11177: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Homo sapiens

25% id,
75% cov

Q9D051: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104) from Mus musculus

26% id,
70% cov

P52904: pyruvate dehydrogenase system (subunit 3/3) (EC 1.2.1.104) from Pisum sativum

28% id,
62% cov

More...

AMB_RS12840 amb2550 WP_011384931.1: thiamine pyrophosphate-binding protein
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

21% id,
87% cov

AMB_RS06885 amb1359 WP_231849011.1: Pls/PosA family non-ribosomal peptide synthetase
is similar to:
PaperBLAST

LNBA_ASPFN / B8NWW5: Aldehyde reductase lnbA; Lnb diastereomeric piperazines biosynthesis cluster protein A; Non-canonical nonribosomal peptide synthetase lnbA; EC 1.2.1.101 from Aspergillus flavus

32% id,
36% cov

LNAA_ASPFN / B8NTZ9: Aldehyde reductase lnaA; Lna diastereomeric piperazines biosynthesis cluster protein A; Non-canonical nonribosomal peptide synthetase lnaA; EC 1.2.1.101 from Aspergillus flavus
B8NTZ9: L-tyrosine reductase (EC 1.2.1.101) from Aspergillus flavus

32% id,
35% cov

phaP AMB_RS23250 WP_050750642.1: phasin family protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

25% id,
39% cov

AMB_RS22735 amb4493 WP_011386837.1: DUF3426 domain-containing protein
is similar to:
PaperBLAST

AF123459 / Q9XYS5: dihydrolipoyl dehydrogenase-binding protein (EC 1.2.1.104) from Ascaris suum

35% id,
26% cov

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

53% id,
7% cov

AMB_RS07195 amb1422 WP_231849019.1: AMP-binding protein
is similar to:
PaperBLAST

LNBA_ASPFN / B8NWW5: Aldehyde reductase lnbA; Lnb diastereomeric piperazines biosynthesis cluster protein A; Non-canonical nonribosomal peptide synthetase lnbA; EC 1.2.1.101 from Aspergillus flavus

26% id,
34% cov

AMB_RS06895 amb1362 WP_011383772.1: SEL1-like repeat protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

25% id,
32% cov

AMB_RS11780 amb2332 WP_011384729.1: glutamate synthase subunit beta
is similar to:
PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

25% id,
31% cov

AMB_RS01650 amb0326 WP_011382773.1: chemotaxis protein CheW
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

27% id,
26% cov

AMB_RS26350 amb1360 WP_011383770.1: AMP-binding protein
is similar to:
PaperBLAST

LNAA_ASPFN / B8NTZ9: Aldehyde reductase lnaA; Lna diastereomeric piperazines biosynthesis cluster protein A; Non-canonical nonribosomal peptide synthetase lnaA; EC 1.2.1.101 from Aspergillus flavus
B8NTZ9: L-tyrosine reductase (EC 1.2.1.101) from Aspergillus flavus

29% id,
22% cov

LNBA_ASPFN / B8NWW5: Aldehyde reductase lnbA; Lnb diastereomeric piperazines biosynthesis cluster protein A; Non-canonical nonribosomal peptide synthetase lnbA; EC 1.2.1.101 from Aspergillus flavus

26% id,
21% cov

AMB_RS14560 amb2893 WP_011385270.1: hypothetical protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

26% id,
23% cov

AMB_RS14000 amb2785 WP_011385163.1: NADH-quinone oxidoreductase subunit C
is similar to:
PaperBLAST

LYSY_THET2 / O50146: [LysW]-L-2-aminoadipate 6-phosphate reductase; EC 1.2.1.103 from Thermus thermophilus
lysY / O50146: [amino-group carrier protein]-L-2-aminoadipate 6-phosphate reductase (EC 1.2.1.103) from Thermus thermophilus
O50146: [amino group carrier protein]-6-phospho-L-2-aminoadipate reductase (EC 1.2.1.103); [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Thermus thermophilus

26% id,
23% cov

AMB_RS17115 amb3384 WP_011385744.1: pentapeptide repeat-containing protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

37% id,
14% cov

AMB_RS03010 amb0582 WP_043743290.1: hypothetical protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

34% id,
14% cov

AMB_RS26035 amb3003 WP_011385379.1: protein-glutamate O-methyltransferase CheR
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

38% id,
9% cov

AMB_RS17475 amb3454 WP_011385814.1: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

30% id,
11% cov

AMB_RS16225 amb3212 WP_011385577.1: TonB C-terminal domain-containing protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

52% id,
6% cov

AMB_RS21755 amb4302 WP_231848921.1: hypothetical protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

45% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 38 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2521433-2522881 (frame +2) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

P20285: pyruvate dehydrogenase system (EC 1.2.1.104) from Neurospora crassa
Also see hits to annotated proteins above

44% id,
96% cov

P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli
Also see hits to annotated proteins above

34% id,
68% cov

Q0WQF7: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104) from Arabidopsis thaliana
Also see hits to annotated proteins above

32% id,
47% cov

2519102-2520205 (frame +2) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence
is similar to:
PaperBLAST

P52903: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104) from Solanum tuberosum
Also see hits to annotated proteins above

49% id,
87% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory