Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 157 curated entries in PaperBLAST's database that match '1.2.1.3'.

These curated entries have 118 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS09075 amb1793 WP_043743989.1: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARGC_ARATH / Q93Z70: Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Arabidopsis thaliana

66% id,
86% cov

ARGC_ORYSJ / Q6AV34: Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Oryza sativa

67% id,
83% cov

ARGC_GEOSE / Q07906: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Geobacillus stearothermophilus

45% id,
100% cov

More...

gabD AMB_RS06710 amb1321 WP_011383730.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

58% id,
91% cov

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

38% id,
99% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

40% id,
93% cov

More...

gabD AMB_RS04160 amb0814 WP_011383257.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

55% id,
93% cov

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

39% id,
95% cov

cnbD / Q38M39: 2-aminomuconate semialdehyde dehydrogenase (EC 1.2.1.32) from Comamonas testosteroni

37% id,
97% cov

More...

AMB_RS04115 amb0805 WP_011383248.1: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
is similar to:
PaperBLAST

A9YD19: retinal dehydrogenase (EC 1.2.1.36) from Danio rerio

43% id,
98% cov

Q83XU8: aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Burkholderia cepacia

43% id,
95% cov

AL8A1_HUMAN / Q9H2A2: 2-aminomuconic semialdehyde dehydrogenase; Aldehyde dehydrogenase 12; Aldehyde dehydrogenase family 8 member A1; EC 1.2.1.32 from Homo sapiens
Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

42% id,
98% cov

More...

AMB_RS18195 amb3595 WP_011385953.1: DUF1487 domain-containing protein
is similar to:
PaperBLAST

V4GH04: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

42% id,
97% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

42% id,
97% cov

Q402C7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sphingomonas sp.

42% id,
94% cov

More...

AMB_RS13050 amb2593 WP_011384974.1: aldehyde dehydrogenase family protein
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

40% id,
99% cov

AL1A1_HORSE / P15437: Retinal dehydrogenase 1; RALDH 1; RalDH1; Aldehyde dehydrogenase, cytosolic; EC 1.2.1.-; EC 1.2.1.36 from Equus caballus

38% id,
94% cov

ald / Q8NLZ0: acetaldehyde dehydrogenase (EC 1.2.1.3; EC 1.2.1.46) from Corynebacterium glutamicum

38% id,
94% cov

More...

AMB_RS12610 amb2507 WP_011384888.1: bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA
is similar to:
PaperBLAST

Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

31% id,
97% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

31% id,
97% cov

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

30% id,
98% cov

More...

AMB_RS00880 amb0173 WP_011382620.1: 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase
is similar to:
PaperBLAST

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

28% id,
96% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

28% id,
94% cov

AL1A1_RAT / P51647: Retinal dehydrogenase 1; RALDH 1; RalDH1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; EC 1.2.1.-; EC 1.2.1.36 from Rattus norvegicus
P51647: retinal dehydrogenase (EC 1.2.1.36) from Rattus norvegicus

27% id,
94% cov

More...

AMB_RS14225 WP_043744606.1: AMP-dependent synthetase
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

26% id,
51% cov

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

31% id,
23% cov

AMB_RS13085 amb2600 WP_011384981.1: AMP-binding protein
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

25% id,
47% cov

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

27% id,
43% cov

AMB_RS07195 amb1422 WP_083763599.1: acetate--CoA ligase
is similar to:
PaperBLAST

Q4L235: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Homo sapiens

27% id,
31% cov

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

29% id,
15% cov

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe

26% id,
13% cov

More...

AMB_RS14445 amb2869 WP_011385246.1: benzoate-CoA ligase family protein
is similar to:
PaperBLAST

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

26% id,
31% cov

AMB_RS10225 amb2025 WP_011384428.1: feruloyl-CoA synthase
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

24% id,
31% cov

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

24% id,
19% cov

AMB_RS22045 amb4358 WP_011386705.1: acetylglutamate kinase
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

29% id,
24% cov

arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

26% id,
25% cov

AMB_RS11445 amb2262 WP_011384660.1: 2-aminobenzoate-CoA ligase
is similar to:
PaperBLAST

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

25% id,
25% cov

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

29% id,
11% cov

AMB_RS18140 amb3584 WP_043745116.1: malonyl-CoA synthase
is similar to:
PaperBLAST

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

28% id,
20% cov

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

24% id,
20% cov

AMB_RS14955 amb2972 WP_011385349.1: acyl-[ACP]--phospholipid O-acyltransferase
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

26% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 19 reading frames. Except for 6 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1932295-1933596 (frame -1) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

ARGC_ARATH / Q93Z70: Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Arabidopsis thaliana
Also see hits to annotated proteins above

61% id,
100% cov

ARGC_ORYSJ / Q6AV34: Probable N-acetyl-gamma-glutamyl-phosphate reductase, chloroplastic; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Oryza sativa
Also see hits to annotated proteins above

64% id,
90% cov

P9WPZ9: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Mycobacterium tuberculosis
Also see hits to annotated proteins above

40% id,
100% cov

3023512-3025341 (frame +1) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis
Also see hits to annotated proteins above

27% id,
52% cov

1342078-1342770 (frame +1) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

amnC / O68391: 2-aminomucoate semialdehyde dehydrogenase subunit (EC 1.2.1.32) from Pseudomonas oleovorans
Also see hits to annotated proteins above

48% id,
26% cov

1471876-1475502 (frame -1) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

27% id,
34% cov

LYS2_SCHPO / P40976: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Schizosaccharomyces pombe
lys1 / RF|NP_594314.1: aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

26% id,
32% cov

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis
Also see hits to annotated proteins above

29% id,
21% cov

4760651-4761631 (frame +2) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

26% id,
28% cov

1539119-1539439 (frame -3) on NC_007626.1 Magnetospirillum magneticum AMB-1 DNA, complete genome
is similar to:
PaperBLAST

amnC / O68391: 2-aminomucoate semialdehyde dehydrogenase subunit (EC 1.2.1.32) from Pseudomonas oleovorans
Also see hits to annotated proteins above

32% id,
22% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory