Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 13 curated entries in PaperBLAST's database that match '1.2.7.5'.

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS14710 amb2922 WP_011385299.1: aldehyde ferredoxin oxidoreductase
is similar to:
PaperBLAST

aor / Q5P143: tungsten-containing aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Aromatoleum aromaticum

67% id,
100% cov

B0K0E5: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Thermoanaerobacter sp.

51% id,
100% cov

AOR_PYRFU / Q51739: Tungsten-containing aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / RF|NP_578075.1: aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / Q51739: tungsten-containing aldehyde ferredoxin oxidoreductase monomer (EC 1.2.7.5) from Pyrococcus furiosus
Q51739: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Pyrococcus furiosus

49% id,
99% cov

More...

AMB_RS07515 amb1488 WP_011383898.1: aldehyde ferredoxin oxidoreductase
is similar to:
PaperBLAST

B0K0E5: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Thermoanaerobacter sp.

33% id,
93% cov

AOR_PYRFU / Q51739: Tungsten-containing aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / RF|NP_578075.1: aldehyde ferredoxin oxidoreductase; EC 1.2.7.5 from Pyrococcus furiosus
aor / Q51739: tungsten-containing aldehyde ferredoxin oxidoreductase monomer (EC 1.2.7.5) from Pyrococcus furiosus
Q51739: aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Pyrococcus furiosus

33% id,
91% cov

aor / Q5P143: tungsten-containing aldehyde ferredoxin oxidoreductase (EC 1.2.7.5) from Aromatoleum aromaticum

28% id,
91% cov

More...

AMB_RS08495 amb1680 WP_011384089.1: hypothetical protein
is similar to:
PaperBLAST

B9MQI1: aldehyde ferredoxin oxidoreductase (subunit 1/2) (EC 1.2.7.5); glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) (subunit 1/2) (EC 1.2.7.6) from Caldicellulosiruptor bescii

29% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory