Curated BLAST for Genomes

 

Curated BLAST

Searching in Magnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 6 curated entries in PaperBLAST's database that match '1.3.1.13'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Magnetospirillum magneticum AMB-1, or try another query

AMB_RS20115 amb3975 WP_011386329.1: prephenate dehydrogenase/arogenate dehydrogenase family protein
is similar to:
PaperBLAST

A8AAX2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis

23% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory