Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)
Found 8 curated entries in PaperBLAST's database that match '1.3.1.13' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query
| AMB_RS20115 amb3975 WP_011386329.1: prephenate/arogenate dehydrogenase family protein is similar to: | PaperBLAST |
A8AAX2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Ignicoccus hospitalis | 23% id, 58% cov |
| AMB_RS01285 amb0253 WP_011382700.1: DUF1932 domain-containing protein is similar to: | PaperBLAST |
A0A101IGG2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Methanothrix harundinacea | 28% id, 38% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4384816-4386807 (frame +1) on NC_007626.1 Paramagnetospirillum magneticum AMB-1, complete sequence is similar to: | PaperBLAST |
A0A101IGG2: prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Methanothrix harundinacea | 27% id, 77% cov |
Lawrence Berkeley National Laboratory