Curated BLAST for Genomes

 

Curated BLAST

Searching in Paramagnetospirillum magneticum AMB-1 (GCF_000009985.1)

Found 16 curated entries in PaperBLAST's database that match '1.4.1.16' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Paramagnetospirillum magneticum AMB-1, or try another query

AMB_RS00665 amb0132 WP_011382579.1: Gfo/Idh/MocA family oxidoreductase
is similar to:
PaperBLAST

DAPDH_URETH / G1UII1: Meso-diaminopimelate D-dehydrogenase; DAPDH; Meso-DAP dehydrogenase; EC 1.4.1.16 from Ureibacillus thermosphaericus
G1UII1: diaminopimelate dehydrogenase (EC 1.4.1.16) from Ureibacillus thermosphaericus

32% id,
21% cov

Q890V3: diaminopimelate dehydrogenase (EC 1.4.1.16) from Clostridium tetani

30% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory